Machine Learning and Neural Networks group

Dipartimento di Ingegneria dell'Informazione
Università di Firenze
Via Santa Marta 3
50139 Firenze - Italy


DISULFIND

Cysteines Disulfide Bonding State and Connectivity Predictor


Results for jKDK6k
         .........10........20........30........40........50........60........70........
AA       AARVVRSIFSRTLETAQNSVRVLQKAAITILDGISQYSLRLIDAMMFTSDLATNNLVVMAYITGGVVQLTSQWLTNIFG
DB_state                                                                                
DB_conf                                                                                 

         80........90........100.......110.......120.......130.......140
AA       TVYEKLKPVLDWLEEKFKEGVEFLRDGWEIVKFISTCACEIVGGQIVTCAKEIKESVQTFF
DB_state                                     0 0         0            
DB_conf                                      3 1         2            

  • Please cite:
    • A. Ceroni, A. Passerini, A. Vullo and P. Frasconi. DISULFIND: a Disulfide Bonding State and Cysteine Connectivity Prediction Server, Nucleic Acids Research, 34(Web Server issue):W177--W181, 2006.
  • Contact information:
  • Abbreviations used:
    • AA amino acid sequence
    • DB_state predicted disulfide bonding state (1=disulfide bonded, 0=not disulfide bonded)
    • DB_conf confidence of disulfide bonding state prediction (0=low to 9=high)
      A red colour means that the viterbi aligner overruled the most likely predition for that residue in order to achieve a consistent prediction at a protein level (even number of disulfide bonded cysteines, as interchain bonds are ignored). See papers for details.


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© 2003-2006 Machine Learning and Neural Networks Group.
For questions and comments: disulfind at ai dot dinfo dot unifi dot it.